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ypmQ [2017-11-14 13:11:58]
accessory lipoprotein required for assembly of the Cu(A) center of cytochrome c oxidase caa3
function
maturation of cytochrome C oxidase caa3
Genomic Context
categories
[category|SW 2|Metabolism] → [category|SW 2.1|Electron transport and ATP synthesis] → [category|SW 2.1.2|Respiration] → [category|SW 2.1.2.1|Terminal oxidases][category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]Gene
Coordinates
2,291,703 → 2,292,284
The protein
Catalyzed reaction/ biological activity
electron transfer to the maturing oxidase [protein|72D5442C0EF3B404F7B615366E357B68C863CEB6|CtaC] [Pubmed|19921776][SW|Cofactors]
contains copper bound by two cysteines and a histidine residue [Pubmed|19921776]Structure
[PDB|1XZO] [pubmed|15723536][SW|Localization]
cell membrane [Pubmed|19921776]Expression and Regulation
Operons
genes
[gene|0337C7B1CFA1C59710A7E6463A370F8C39AAC8EA|sco]-[gene|4722C78DB10289939145BDD079661021160C688C|ypmR]-[gene|6E668E7BCD26FCC9873D538385DAF851D7CEC8FC|ypmS]-[gene|3EDC7B00A30AA32E0F8D4FB40011A4BF08B1AB18|ypmT]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-A882 (ypmQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/882 NBRP B. subtilis, Japan]BKE21750 (Δ[gene|0337C7B1CFA1C59710A7E6463A370F8C39AAC8EA|sco]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21750 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGACATCCATCCTTTCCA, downstream forward: _UP4_TAAGCTAAGAGACTAGGCATBKK21750 (Δ[gene|0337C7B1CFA1C59710A7E6463A370F8C39AAC8EA|sco]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21750 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGACATCCATCCTTTCCA, downstream forward: _UP4_TAAGCTAAGAGACTAGGCATReferences
14680962,14766920,16305244,19027886,10837475,19921776,20232870,21333651,21945854,22036877,25192666,21069401,15723536,29131589 
