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vmlR [Tue Dec 13 2016 11:16:31 GMT+0100 (CET)]
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vmlR [Tue Dec 13 2016 11:16:31 GMT+0100 (CET)]

ABC transporter (ATP-binding protein), efflux of antibiotics (virginiamycin M, lincomycin)
locus
BSU05610
pI
6.00
mw
62.00 kDa
function
efflux of antibiotics (virginiamycin M, lincomycin)
product
antibiotic efflux ABC transporter (ATP-binding protein)
essential
no
synonyms
expZ
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.13|Resistance against toxins/ antibiotics]

    • [SW|Categories] containing this gene/protein

  • [SW|ABC transporters], [SW|resistance against toxins/ antibiotics]

    • This gene is a member of the following [SW|regulons]

  • [SW|RNA switch/ other]

    • Gene

    Coordinates on the chromosome (coding sequence)
    604,736 -> 606,379

    The protein

    Protein family

  • [SW|ABC transporter] family (according to Swiss-Prot)

    • Expression and Regulation

    Operon

  • ''vmlR'' [Pubmed|16109936]

    • [SW|Sigma factor]

  • [protein|search|SigA] [Pubmed|16109936]

    • Regulation

  • induced by virginiamycin M or lincomycin [Pubmed|16109936]

    • Regulatory mechanism

  • transcriptional antitermination, details are unknown [Pubmed|16109936]

    • Additional information

  • A [protein|search|ncRNA] is predicted between '[protein|search|vmlR]' and '[protein|search|ydgF]' [PubMed|20525796]
  • term-seq has identified a potential novel regulatory RNA element including an intrinsic transcription terminator upstream of ''vmlR'' [Pubmed|27120414]

    • References

  • 10092453,16109936,20525796,24687494,27120414